Pooling annotations from different databases in InterProScan

Pooling annotations from different databases in InterProScan

0

Is it acceptable to pool the annotations from the various sources InterProScan offers, and annotate a sequence with a subset of these?

For example, if I have something like so:

id  annot src start stop
seq1  dom1  Pfam  100  120
seq1  dom1a  CDD  101  128
seq1  dom2  Pfam  60  80

Is it acceptable to take dom1a from CDD and dom2 from Pfam, and leave out dom1 from Pfam (since it’s redundant with dom1a)?


annotations


interproscan


protein


sequence


domain

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