Extract reads used for contigs assembly

Extract reads used for contigs assembly

1

Hi all,

Basically I want to realize a plot with all reads from each contigs resulting from my asssembly with the last version of Velvet. To do that I am looking for a script or anything else to parse an AFG file or any other solution to get a file with each contigs of my assembly and all the reads used for the assembly of those contigs.

Best,


assembly


sequencing


RNA-Seq

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