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Open Source Biology & Genetics Interest Group

Open source scripts, reports, and preprints for in vitro biology, genetics, bioinformatics, crispr, and other biotech applications.

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 Posted in Research

frequency of residue interaction in MD simulation

 September 16, 2021

frequency of residue interaction in MD simulation

0



Is there any tool that can help calculate frequency of residue interaction from the various MD simulation frames. Any tool that can tell these two particular amino acid interact x no. of times in n frames of MD simulation done.


MD-simulation


molecular


dynamics


MD-trajectory


Protein


Residue

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