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Open Source Biology & Genetics Interest Group

Open source scripts, reports, and preprints for in vitro biology, genetics, bioinformatics, crispr, and other biotech applications.

 Posted in Research

seurat `@assays$RNA@counts` vs `@assays$RNA@data`?

 August 9, 2021

seurat `<obj>@assays$RNA@counts` vs `<obj>@assays$RNA@data`?

1

I have two matrices called <object>@assays$RNA@counts and <object>@assays$RNA@data that are both real non-negative.

What is the difference between these?


seurat

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11 minutes ago by


mk

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Tagged AMP, RNA, Seurat

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k-mer counters – presence/absence matrix →
← Low assignment rate with featureCounts

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