Try with different tools HOMER, MEME etc.
May be try +/- 10bp from summit of peak.
If same motif comes out than the probability increase for direct binding. Although this approach is just to get an idea that there is a direct interaction.
Open Source Biology & Genetics Interest Group
Open source scripts, reports, and preprints for in vitro biology, genetics, bioinformatics, crispr, and other biotech applications.
Open Source Biology & Genetics Interest Group
Open source scripts, reports, and preprints for in vitro biology, genetics, bioinformatics, crispr, and other biotech applications.
Try with different tools HOMER, MEME etc.
May be try +/- 10bp from summit of peak.
If same motif comes out than the probability increase for direct binding. Although this approach is just to get an idea that there is a direct interaction.
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