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Open Source Biology & Genetics Interest Group

Open source tools and preprints for in vitro biology, genetics, bioinformatics, crispr, and other biotech applications.

 Posted in Research

Comment: Direct – indirect binding of a transcription factor in chip-seq analysis

 August 10, 2021

Try with different tools HOMER, MEME etc.
May be try +/- 10bp from summit of peak.

If same motif comes out than the probability increase for direct binding. Although this approach is just to get an idea that there is a direct interaction.

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