How to visualise a phylogenetic tree with amino acids (double letter repeat) multiple-sequence alignment?
I have a fasta file as shown below,
I have a newick file as follows,
I need to visualise both the tree and rvd.fasta file (multiple-sequence alignment file) together. The expected output illustration should be similar to the model_picture shown here,
With the help of my previous post and ete toolkit I have learned how to combine phylogenetic tree with multiple-sequence alignment, but here the multiple-sequence alignment is different from the usual msa pattern. Therefore, please help me to do the same.
Thanks in advance.
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