Open Source Biology & Genetics Interest Group
Open source scripts, reports, and preprints for in vitro biology, genetics, bioinformatics, crispr, and other biotech applications.
Open Source Biology & Genetics Interest Group
Open source scripts, reports, and preprints for in vitro biology, genetics, bioinformatics, crispr, and other biotech applications.
Filtering MSA by similiarity to a consensus sequence/motif
Dear all,
anyone knows a good way of filtering or sorting a large multiple sequence alignment (~8000 sequences) by similarity to a given consensus sequence? A solution using python/biopython would be optimal.
Any help is appreciated!
Best
Jonathan
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