Error when trying to run IGV on server

Error when trying to run IGV on server

1

I want to use IGV on a server so I don’t have to download bam files to my local machine. I used conda to install igvtools. When I type igvtools in the command line I get this error:

Using system JDK.
Unrecognized option: –module-path=/home/kmmahan/miniconda3/envs/igv/share/igvtools-2.5.3-0/lib
Error: Could not create the Java Virtual Machine.
Error: A fatal exception has occurred. Program will exit.

  1. Can igv be used on a server
  2. How do you launch igv once it is installed on a server
  3. What are these errors?

Any help would be appreciated


igv

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