How to convert log2 scale RNA-Seq expression data to linear scale data
Hi,
We have run a pilot RNA-Seq study and I used edgeR
package to obtain differential expression results. The results output a gene column
along with the logCPM
, logFC
and p-value
column. I have a question regarding conversion of log2 scale data to linear data for certain analysis. How can this be accomplished. Is there any R package to do this?
For instance, can I use the base function in R like below:
Linear FC value = 2^(logFC)
Linear CPM value = 2^(logCPM)
Thank you,
Toufiq
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