Extract log2FC values from volcanoplot() possible?

Extract log2FC values from volcanoplot() possible?

1

Hello,

An MArrayLM object created with eBayes() from the limma package contains the slot $p.values, which I suppose is used by volcanoplot() to make the volcano plot. Since the volcano plot has log2FC in the x-axis, I suppose volcanoplot() also gets the log2FC values from the MArrayLM object, but how to extract the log2FC values from the MArrayLM object myself?

Thanks!


volcanoplot


R


limma

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