 
|
This package is for version 2.9 of Bioconductor;
for the stable, up-to-date release version, see
aCGH.
Classes and functions for Array Comparative Genomic Hybridization data.
Bioconductor version: 2.9
Functions for reading aCGH data from image analysis output files and clone information files, creation of aCGH S3 objects for storing these data. Basic methods for accessing/replacing, subsetting, printing and plotting aCGH objects.
Author: Jane Fridlyand <jfridlyand at cc.ucsf.edu>, Peter Dimitrov <dimitrov at stat.Berkeley.EDU>
Maintainer: Peter Dimitrov <dimitrov at stat.Berkeley.EDU>
Citation (from within R,
enter citation("aCGH")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("aCGH")
Documentation
To view documentation for the version of this package installed
in your system, start R and enter:
browseVignettes("aCGH")
| aCGH.pdf | ||
| Reference Manual |
Details
| biocViews | CopyNumberVariants, DataImport, Genetics, Software |
| Version | 1.32.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 11 years) |
| License | GPL-2 |
| Depends | R (>= 1.8.0), cluster, survival, multtest |
| Imports | Biobase, cluster, grDevices, graphics, methods, multtest, stats, survival, splines, utils |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | ADaCGH2, CRImage |
| Imports Me | snapCGH |
| Suggests Me | beadarraySNP |
| Build Report |
Package Archives
Follow
Installation instructions to use this
package in your R session.
Read more here: Source link
