Can someone help me? I need to know which data is required to perform different test with DNAsp: intra or interspecies sequences
• 6.1k views
The “sp” in DNAsp stands for “sequence polymorphism” which reflects that this software is principally designed for the analysis of intraspecific sequence variation data. However, there are some analyses of intraspecific variation that require an outgroup sequence (e.g. the HKA or McDonald-Kreitman tests), and therefore DNAsp can accept interspecific sequence data as well.