How to calculate dispersion DESeq2

@gordon-smyth

Last seen 8 hours ago

WEHI, Melbourne, Australia

The formula you quote is for the edgeR package rather than for DESeq2.

The articles you cite are for three different packages.

I doubt very much that you can compute the formula by hand. edgeR is a sophisticated and substantial package and trying to recreate it from scratch is unrealistic.


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