Bioconductor – triform

 
 

This package is for version 3.4 of Bioconductor;
for the stable, up-to-date release version, see
triform.

Triform finds enriched regions (peaks) in transcription factor ChIP-sequencing data

Bioconductor version: 3.4

The Triform algorithm uses model-free statistics to identify peak-like distributions of TF ChIP sequencing reads, taking advantage of an improved peak definition in combination with known profile characteristics.

Author: Karl Kornacker Developer [aut], Tony Handstad Developer [aut, cre]

Maintainer: Thomas Carroll <tc.infomatics at gmail.com>

Citation (from within R,
enter citation("triform")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("triform")

Documentation

To view documentation for the version of this package installed
in your system, start R and enter:

browseVignettes("triform")

 

Details

Package Archives

Follow
Installation
instructions to use this
package in your R session.


Read more here: Source link