scRNAseq – infer type of single-cell chemistry from fastq
it’s a known thing there’s lots of variants of single cell experiments – e.g.
kb --list from kallisto-bustools lists at least 10 different variants. If you’re processing a reasonably big selection of scRNA-seq experiments, it would make sense to try and infer it automatically.
Is there by any chance a tool that can guess the chemistry from the reads?
Thank you in advance, as always.
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