List of all packages in BioConductor transition dependency level 1 failing due issue with either RUnit or testthat

Hi Andreas,

On 02-09-2021 13:12, Andreas Tille wrote:
> I did added an info about all those packages of level 1 that are failing
> either due to RUnit or testthat issues and here is a manually edited
> `grep -A8 '/jobs/' r-bioc-*/debian/changelog` on my local disk:
> r-bioc-biocparallel/debian/changelog:  TODO: 
> r-bioc-biocparallel/debian/changelog-  > 
> BiocGenerics:::testPackage("BiocParallel")
> r-bioc-biocparallel/debian/changelog-  Error in library("RUnit", quietly = 
> TRUE) : 
> r-bioc-biocparallel/debian/changelog-    there is no package called ‘RUnit’
> r-bioc-biocparallel/debian/changelog-  Calls: <Anonymous> -> library
> r-bioc-biocparallel/debian/changelog-  Execution halted

I only checked this one.

> The packages in question are mentioned as Test-Depends and I have no
> idea why these are not found.

No, it's the autodep8 one that fails, not the one mentioned in
d/t/control. I don't recall of the top of my head how you can enhance
autodep8, but $(man autodep8) should come to the rescue.



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