This package is for version 3.11 of Bioconductor;
for the stable, up-to-date release version, see
MetID.
Network-based prioritization of putative metabolite IDs
Bioconductor version: 3.11
This package uses an innovative network-based approach that will enhance our ability to determine the identities of significant ions detected by LC-MS.
Author: Zhenzhi Li <zzrickli at gmail.com>
Maintainer: Zhenzhi Li <zzrickli at gmail.com>
Citation (from within R,
enter citation("MetID")
):
Installation
To install this package, start R (version
“4.0”) and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("MetID")
For older versions of R, please refer to the appropriate
Bioconductor release.
Documentation
To view documentation for the version of this package installed
in your system, start R and enter:
browseVignettes("MetID")
Details
biocViews | AssayDomain, BiologicalQuestion, Infrastructure, KEGG, Network, ResearchField, Software, StatisticalMethod, Technology, WorkflowStep |
Version | 1.6.0 |
In Bioconductor since | BioC 3.8 (R-3.5) (2 years) |
License | Artistic-2.0 |
Depends | R (>= 3.5) |
Imports | utils (>= 3.3.1), stats (>= 3.4.2), devtools (>= 1.13.0), stringr (>= 1.3.0), Matrix (>= 1.2-12), igraph (>= 1.2.1), ChemmineR(>= 2.30.2) |
LinkingTo | |
Suggests | knitr (>= 1.19), rmarkdown (>= 1.8) |
SystemRequirements | |
Enhances | |
URL | github.com/ressomlab/MetID |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
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Installation instructions to use this
package in your R session.
Read more here: Source link