This package is for version 3.11 of Bioconductor;
for the stable, up-to-date release version, see
MetID.
Network-based prioritization of putative metabolite IDs
Bioconductor version: 3.11
This package uses an innovative network-based approach that will enhance our ability to determine the identities of significant ions detected by LC-MS.
Author: Zhenzhi Li <zzrickli at gmail.com>
Maintainer: Zhenzhi Li <zzrickli at gmail.com>
Citation (from within R,
enter citation("MetID")):
Installation
To install this package, start R (version
“4.0”) and enter:
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MetID")
For older versions of R, please refer to the appropriate
Bioconductor release.
Documentation
To view documentation for the version of this package installed
in your system, start R and enter:
browseVignettes("MetID")
Details
| biocViews | AssayDomain, BiologicalQuestion, Infrastructure, KEGG, Network, ResearchField, Software, StatisticalMethod, Technology, WorkflowStep |
| Version | 1.6.0 |
| In Bioconductor since | BioC 3.8 (R-3.5) (2 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.5) |
| Imports | utils (>= 3.3.1), stats (>= 3.4.2), devtools (>= 1.13.0), stringr (>= 1.3.0), Matrix (>= 1.2-12), igraph (>= 1.2.1), ChemmineR(>= 2.30.2) |
| LinkingTo | |
| Suggests | knitr (>= 1.19), rmarkdown (>= 1.8) |
| SystemRequirements | |
| Enhances | |
| URL | github.com/ressomlab/MetID |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report |
Package Archives
Follow
Installation instructions to use this
package in your R session.
Read more here: Source link