Bioconductor – tRNAdbImport

DOI: 10.18129/B9.bioc.tRNAdbImport  

 

Importing from tRNAdb and mitotRNAdb as GRanges objects

Bioconductor version: Release (3.13)

tRNAdbImport imports the entries of the tRNAdb and mtRNAdb (trna.bioinf.uni-leipzig.de) as GRanges object.

Author: Felix G.M. Ernst [aut, cre]

Maintainer: Felix G.M. Ernst <felix.gm.ernst at outlook.com>

Citation (from within R,
enter citation("tRNAdbImport")):

Installation

To install this package, start R (version
“4.1”) and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("tRNAdbImport")

For older versions of R, please refer to the appropriate
Bioconductor release.

Documentation

To view documentation for the version of this package installed
in your system, start R and enter:

browseVignettes("tRNAdbImport")

 

Details

biocViews DataImport, Software, Visualization
Version 1.10.0
In Bioconductor since BioC 3.8 (R-3.5) (3 years)
License GPL-3 + file LICENSE
Depends R (>= 3.5), GenomicRanges, Modstrings, Structstrings, tRNA
Imports Biostrings, BiocGenerics, stringr, xml2, S4Vectors, methods, httr, IRanges, utils
LinkingTo
Suggests knitr, rmarkdown, testthat, httptest, BiocStyle, rtracklayer
SystemRequirements
Enhances
URL
BugReports github.com/FelixErnst/tRNAdbImport/issues
Depends On Me
Imports Me EpiTxDb
Suggests Me
Links To Me
Build Report  

Package Archives

Follow
Installation
instructions to use this
package in your R session.


Read more here: Source link