How to filter GATK vcf file using other programs

hi everyone

I called variants for a WGS project using GATK (HaplotypeCaller). Now, when I want to filter that VCF file by VariantFiltration command in GATK, so the following error message appears.

java.lang.NumberFormatException: For input string: "10.90"

I asked my question in the GATK forum and unfortunately I did not get an answer.

it is worth mentioning that I get mentioned error in both GATK4 and GATK3.7.

1. is there any way to fix this error?

2. Can I do filter VCF file based on “QD < 2 || FS > 60 || MQ < 40 || MQRankSum < -12.5 || ReadPosRankSum < -8 || SOR > 3” criteria using other program like bcftools or vcftools

I will be very happy if you help me to solve this problem

Thanks