ConsensusClusterPlus package

ConsensusClusterPlus package

0

Hi guys,

How can I check the plots individually, when I run the ConsensusClusterPlus command they are generated above each other very fast and end up with Tracking plot, I cant find them anywhere else, I tried to generate them as PDFs or as png but nothing worked.

example=tempdir("F:/Projects/NSCLC Brain met/Liquid biopsy/Plasma/Olink/consensus cluster analysis/")

results = ConsensusClusterPlus(d=data,maxK=6,reps=100,pItem=0.8,pFeature=1,title="example",clusterAlg="hc",distance="pearson",seed=1262118388.71279,plot="png")

Another question is where do I put the number of samples I am clustering is it the reps?

Many thanks!


ConsensusClusterPlus


cluter


R

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