Can’t locate Bio/SeqIO.pm – path error?

Can’t locate Bio/SeqIO.pm – path error?

0

Hi,

I am trying to run snippy on my UBUNTU18 (inside a conda env that has this tool installed) but am getting an error:

Can’t locate Bio/SeqIO.pm in @INC (you may need to install the
Bio::SeqIO.pm module)

I checked the posts here, and tried therefore to install BioPerl using:

sudo apt install bioperl

-> bioperl is already the newest version (1.7.2.-2)

Then I tried:
cpnam Bio::Perl

–> I get multiple “bailing” errors…

I think (I might be wrong) that there is something off with my path but I can’t figure out what it is.
the path reads:

/home/anaconda3/env/snippy/lib/site_perl/5.26.2/x86_64-linux-thread-multi 

Any help would be greatly appreciated,


bioperl

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