How to access WGS files on TCGA for melanoma/SKCM
I was trying to find WGS files for TCGA-SKCM so I can run WGS files through our pipeline and search for circular DNA elements in melanoma samples. However, looking on the TCGA website for this type of cancer, it’s unclear what sequence files are WGS, or indeed if any are present at all.
I have also have an additional question: is there a more efficient way of downloading files by copying the urls and using wget in the terminal for each individual file?
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