Bioconductor – HDCytoData

DOI: 10.18129/B9.bioc.HDCytoData  

 

This package is for version 3.9 of Bioconductor;
for the stable, up-to-date release version, see
HDCytoData.

Collection of high-dimensional cytometry benchmark datasets in Bioconductor object formats

Bioconductor version: 3.9

Data package containing a collection of high-dimensional cytometry benchmark datasets saved in SummarizedExperiment and flowSet Bioconductor object formats, including row and column metadata describing samples, cell populations (clusters), and protein markers.

Author: Lukas M. Weber [aut, cre], Charlotte Soneson [aut]

Maintainer: Lukas M. Weber <lukmweber at gmail.com>

Citation (from within R,
enter citation("HDCytoData")):

Installation

To install this package, start R (version
“3.6”) and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("HDCytoData")

For older versions of R, please refer to the appropriate
Bioconductor release.

Documentation

To view documentation for the version of this package installed
in your system, start R and enter:

browseVignettes("HDCytoData")

 

Details

biocViews ExperimentData, ExperimentHub, ExpressionData, FlowCytometryData, Homo_sapiens_Data, ImmunoOncologyData
Version 1.4.0
License MIT + file LICENSE
Depends ExperimentHub, SummarizedExperiment, flowCore
Imports utils, methods
LinkingTo
Suggests BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL github.com/lmweber/HDCytoData
BugReports github.com/lmweber/HDCytoData/issues
Depends On Me cytofWorkflow
Imports Me
Suggests Me diffcyt
Links To Me
Build Report  

Package Archives

Follow
Installation
instructions to use this
package in your R session.


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