Tools for the reconstruction of demographic history from genome sequences FOR POLYPLOIDS
I want to reconstruct the demographic history of a polyploid species, using genome sequences. But multiple sequentially Markovian coalescence (MSMC) is suitable only for diploid organisms, as stated in the original article. SMC++ also seems to be used only for diploid organisms, if I’m not mistaken.
Could you please suggest similar approaches for polyploid organisms (I am interested in polyploid plants)?
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