probability of two samples sharing a SNP by error
I’m trying to calculate the probability of the same snp occurring in two different samples by chance. I’m pretty lost here, below are the parameters I have, I’m calling SNPs at ≥1% of the reads in targeted, ultradeep sequence data.
gene_length = 500 error_rate = 0.01 read_depth = 100000
• 47 views
Read more here: Source link