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This package is for version 3.4 of Bioconductor;
for the stable, up-to-date release version, see
netprioR.
A model for network-based prioritisation of genes
Bioconductor version: 3.4
A model for semi-supervised prioritisation of genes integrating network data, phenotypes and additional prior knowledge about TP and TN gene labels from the literature or experts.
Author: Fabian Schmich
Maintainer: Fabian Schmich <fabian.schmich at bsse.ethz.ch>
Citation (from within R,
enter citation("netprioR")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("netprioR")
Documentation
Details
| biocViews | CellBasedAssays, Network, Preprocessing, Software |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.4 (R-3.3) (0.5 years) |
| License | GPL-3 |
| Depends | methods, graphics, R (>= 3.3) |
| Imports | stats, Matrix, dplyr, doParallel, foreach, parallel, sparseMVN, ggplot2, gridExtra, pROC |
| LinkingTo | |
| Suggests | knitr, BiocStyle, pander |
| SystemRequirements | |
| Enhances | |
| URL | bioconductor.org/packages/netprioR |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow
Installation instructions to use this
package in your R session.
Read more here: Source link
