Batch effects

Batch effects

0

Hi!
I’m new at bioinformatics and I’m working with a project where I combine several datasets from GEO. I retrieve the data from GREIN(GEO RNA-seq Experiment Interactive Navigator) which has processed all the datasets in the same way. They provide raw and normalised data.

My question is when and how do I correct for batch effects?

Thanks a lot!


Batch-effects


transcriptomics

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