Can’t download files from the ENA (European Nucleotide Archive) site

Looks like ENA does not have the data links. If you are simply interested in following the tutorial then you can let ENA know about this problem. If you actually want the data then do the following.

Use sra-explorer and search with PRJEB1787. Use directions here: C: sra-explorer : find SRA and FastQ download URLs in a couple of clicks

Remember to use second tab to download from SRA after you add samples you need to your cart. You will have to use fastq(er)-dump from sratoolkit to convert the .sra files. There is over 3 TB of sequence data in this project.


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