Which RNA type I should considered as long non-coding RNAs
Hello
We have exosome-sequensing (from plasma). In raw read counts file, I see 72650 gene names.
This is how my read count file looks like
I have created a percentage bar chart for categories of RNAs annotated in this exosome-seq like
Which category (RNA type) I should consider as long non-coding RNA (lncRNA)
?
Can I consider this observed24% Long intergenic non-coding RNA (lincRNA) (sense+antisense)
as long non-coding RNA (lncRNA)
?
But as I read Generally speaking we don’t expect much lncRNA/mRNA in plasma and much of that will be heavily fragmented which makes it very difficult to sequence. So how I see 24% of lincRNAs ?
If this was your data, which type of RNAs here you would considered as long non-coding RNA (lncRNA)
?
Thanks for any intuition
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