Bioconductor – OncoSimulR

 
 

This package is for version 3.0 of Bioconductor;
for the stable, up-to-date release version, see
OncoSimulR.

Simulation of cancer progresion with order restrictions

Bioconductor version: 3.0

Functions for simulating and plotting cancer progression data, including drivers and passengers, and allowing for order restrictions. Simulations use continuous-time models (based on Bozic et al., 2010 and McFarland et al., 2013) and fitness functions account for possible restrictions in the order of accumulation of mutations.

Author: Ramon Diaz-Uriarte.

Maintainer: Ramon Diaz-Uriarte <rdiaz02 at gmail.com>

Citation (from within R,
enter citation("OncoSimulR")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("OncoSimulR")

Documentation

To view documentation for the version of this package installed
in your system, start R and enter:

browseVignettes("OncoSimulR")

 

Details

Package Archives

Follow
Installation
instructions to use this
package in your R session.


Read more here: Source link