Bioconductor – rSFFreader

DOI: 10.18129/B9.bioc.rSFFreader  

 

rSFFreader reads in sff files generated by Roche 454 and Life Sciences Ion Torrent sequencers

Bioconductor version: Release (3.6)

rSFFreader reads sequence, qualities and clip point values from sff files generated by Roche 454 and Life Sciences Ion Torrent sequencers into similar classes as are present for fastq files.

Author: Matt Settles <mattsettles at gmail.com>, Sam Hunter, Brice Sarver, Ilia Zhbannikov, Kyu-Chul Cho

Maintainer: Matt Settles <mattsettles at gmail.com>

Citation (from within R,
enter citation("rSFFreader")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("rSFFreader")

Documentation

To view documentation for the version of this package installed
in your system, start R and enter:

browseVignettes("rSFFreader")

 

Details

Package Archives

Follow
Installation
instructions to use this
package in your R session.


Read more here: Source link