R Shiny

hello community,

I want to generate a volcanoplot with a csv file ==> file1: gene;Id;log2FC;P-Value;P-Value-adj
in my server :

server <- function(input, output) {
re <- reactive({
req(input$file1)
data <- read.csv(input$file1$datapath, sep = “;”)
return(data)
})

output$table <- renderDataTable({
    D <- re()
    DT::datatable(D)
}
)
output$plot2<-renderPlot({
    D <- re() 
    D$sig <- as.factor(abs(D$log2FC) > 2 & D < 0.05)
    D$negLogFDR <- -log10(D$padj)
    ggplot(plot(x=log2FC, y=negLogFDR, color=sig)) +
        geom_point() +
        coord_cartesian() +
        ylab("-log10 FDR") +
        xlab("log2 fold change")

})
}

but it can’t retieve the values from my array

thank you in advance