DOI: 10.18129/B9.bioc.JctSeqData
This package is for version 3.9 of Bioconductor;
for the stable, up-to-date release version, see
JctSeqData.
Example Junction Count data for use with JunctionSeq
Bioconductor version: 3.9
Junction count data from an example dataset taken from a subset of the RNA-seq reads from six samples. Data was subsampled and modified to provide edge cases for testing and to reduce file sizes.
Author: Stephen Hartley [aut, cre] (PhD)
Maintainer: Stephen Hartley <JunctionSeq-contact at list.nih.gov>
Citation (from within R,
enter citation("JctSeqData")
):
Installation
To install this package, start R (version
“3.6”) and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("JctSeqData")
For older versions of R, please refer to the appropriate
Bioconductor release.
Documentation
To view documentation for the version of this package installed
in your system, start R and enter:
browseVignettes("JctSeqData")
Example Walkthrough | ||
Reference Manual | ||
Text | NEWS | |
Text | LICENSE |
Details
biocViews | ExperimentData, GEO, Genome, RNASeqData, Rattus_norvegicus_Data, RepositoryData |
Version | 1.14.0 |
License | file LICENSE |
Depends | R (>= 3.3) |
Imports | |
LinkingTo | |
Suggests | knitr, BiocStyle, DESeq2, DEXSeq, edgeR, JunctionSeq |
SystemRequirements | |
Enhances | |
URL | hartleys.github.io/JunctionSeq/ |
BugReports | github.com/hartleys/JunctionSeq/issues |
Depends On Me | |
Imports Me | |
Suggests Me | JunctionSeq |
Links To Me | |
Build Report |
Package Archives
Follow
Installation instructions to use this
package in your R session.
Read more here: Source link