Tools / Packages to assess allele specific methylation?

Tools / Packages to assess allele specific methylation?

0

Hi everyone,

Are there any tools/packages/pipelines to assess allele specific methylation for human data?

I have used the following methods:

1. TrimGalore > Bismark Alignment > SNPsplit (Read split)> Bismark (methylation call)
or
2. TrimGalore > Bismark  Alignment  > Damefinder (Coverage/Meth on SNP)

But are other approaches available?

Thanks


allele


specific


SNP


methylation


Bismark

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2 hours ago by


Ankit

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290

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