Bioconductor – ChIPexoQualExample

DOI: 10.18129/B9.bioc.ChIPexoQualExample  

This package is for version 3.10 of Bioconductor;
for the stable, up-to-date release version, see
ChIPexoQualExample.

Example data for the ChIPexoQual package, which implements a quality control pipeline for ChIP-exo data

Bioconductor version: 3.10

Data for the ChIPexoQual package, consisting of (3) chromosome 1 aligned reads from a ChIP-exo experiment for FoxA1 in mouse liver cell lines aligned to the mm9 genome.

Author: Rene Welch, Dongjun Chung, Sunduz Keles

Maintainer: Rene Welch <welch at stat.wisc.edu>

Installation

To install this package, start R (version
“3.6”) and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ChIPexoQualExample")

For older versions of R, please refer to the appropriate
Bioconductor release.

Documentation

To view documentation for the version of this package installed
in your system, start R and enter:

browseVignettes("ChIPexoQualExample")

Details

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Follow
Installation instructions to use this
package in your R session.