Would you please give me some advices about how to change header?

Would you please give me some advices about how to change header?

2

Hi, all.

I would like to edit headers from fasta.

I have fasta with random header as following(headers are separated by space);

>3R5.1a wormpep=CE24758 gene=WBGene00007065 locus=pot-3 status=Confirmed uniprot=G5EFG7 insdc=CAA21777.2 product="POT1PC domain-containing protein"
>2RSSE.1a wormpep=CE32785 gene=WBGene00007064 locus=rga-9 status=Confirmed uniprot=A4F337 insdc=CCD61138.1 product="Rho-GAP domain-containing protein"
>2L52.1a wormpep=CE32090 gene=WBGene00007063 status=Confirmed uniprot=A4F336 insdc=CCD61130.1

I would like to edit it like a following;

>3R5.1a gene=WBGene00007065 locus=pot-3    
>2RSSE.1a gene=WBGene00007064 locus=rga-9
>2L52.1a gene=WBGene00007064 -

In fact, this file is so long that command operations are required as you know.
But I don’t know how to edit random header.
Could you please give me a help?

I really appreciate your help in advance!
Thank you.


bash


Linux


BLAST


fasta

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