Complexity of gene expression data in scRNAseq

2 hours ago

esergison

0

Hello,

I’m a biologist trying to understand some scRNAseq data. I’ve been following this tutorial: github.com/hbctraining/scRNA-seq/blob/master/lessons/04_SC_quality_control.md

I’m looking at dot plots of complexity that graph unique transcripts vs sequencing reads and I’m having trouble understanding what complexity means here. Is this a way of filtering out cells with low transcript expression?

Thanks!

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