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This package is for version 2.10 of Bioconductor;
for the stable, up-to-date release version, see
goseq.
Gene Ontology analyser for RNA-seq and other length biased data
Bioconductor version: 2.10
Detects Gene Ontology and/or other user defined categories which are over/under represented in RNA-seq data
Author: Matthew Young
Maintainer: Matthew Young <myoung at wehi.edu.au>
Citation (from within R,
enter citation("goseq")
):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("goseq")
Documentation
To view documentation for the version of this package installed
in your system, start R and enter:
browseVignettes("goseq")
goseq User’s Guide | ||
Reference Manual |
Details
biocViews | GO, GeneExpression, HighThroughputSequencingData, RNAseq, Software, Transcription |
Version | 1.8.0 |
In Bioconductor since | BioC 2.6 (R-2.11) (6 years) |
License | LGPL (>= 2) |
Depends | R (>= 2.11.0), BiasedUrn, geneLenDataBase |
Imports | mgcv, graphics, stats, utils, AnnotationDbi |
LinkingTo | |
Suggests | GO.db, edgeR, org.Hs.eg.db |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | oneChannelGUI |
Build Report |
Package Archives
Follow
Installation instructions to use this
package in your R session.
Read more here: Source link