Welcome to the forum @bzuber.
As you already suspected, jobs submitted through the web UI are counted against the quota of the system user that owns the cryoSPARC instance. Cluster resources and quota need to be allocated according to the combined needs of all cryoSPARC users. You may still capture information about the individual cryoSPARC users for accounting via the job_creator
or cryosparc_username
submission script variables. Such accounting would require a custom add-on to your existing cluster management software.
Alternatively, you could run a separate instance for each user and allocate resources as usual, but that would entail foregoing the project-sharing facilities implemented in cryoSPARC.
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