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This package is for version 3.4 of Bioconductor;
for the stable, up-to-date release version, see
pRolocGUI.
Interactive visualisation of spatial proteomics data
Bioconductor version: 3.4
The package pRolocGUI comprises functions to interactively visualise organelle (spatial) proteomics data on the basis of pRoloc, pRolocdata and shiny.
Author: Lisa M Breckels, Thomas Naake and Laurent Gatto
Maintainer: Laurent Gatto <lg390 at cam.ac.uk>, Lisa M Breckels <lms79 at cam.ac.uk>
Citation (from within R,
enter citation("pRolocGUI")
):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("pRolocGUI")
Documentation
pRolocGUI – Interactive visualisation of spatial proteomics data | ||
Reference Manual | ||
Text | NEWS | |
Video | pRoloc, pRolocdata and pRolocGUI |
Details
biocViews | GUI, Proteomics, Software, Visualization |
Version | 1.8.2 |
In Bioconductor since | BioC 3.0 (R-3.1) (2.5 years) |
License | GPL-2 |
Depends | methods, R (>= 3.1.0), pRoloc(>= 1.11.1), Biobase, MSnbase(>= 1.13.11) |
Imports | shiny (>= 0.9.1), scales, dplyr, DT (>= 0.1.40), graphics, utils |
LinkingTo | |
Suggests | pRolocdata, knitr, BiocStyle, rmarkdown |
SystemRequirements | |
Enhances | |
URL | ComputationalProteomicsUnit.github.io/pRolocGUI/ |
BugReports | github.com/ComputationalProteomicsUnit/pRolocGUI/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Package Archives
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Installation instructions to use this
package in your R session.
Read more here: Source link