Per base sequence quality – fastqc
Hi everyone,
I am new to bioinformatics, I am asking a very basic question here,
I have paired-end fastq data, I did fastqc, and in this per base sequence quality, few reads are in the red region, and there is no adapter and overrepresented sequence.
should I do the trimming of my read?
if I should then what parameter I should give in trimmomatic?
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