KEGG T01003: 286761

Entry
286761            CDS       T01003                                 
Symbol

Vcpip1

Name

(RefSeq) deubiquitinating protein VCPIP1

  KO
K11861   deubiquitinating protein VCIP135 [EC:3.4.19.12]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    286761 (Vcpip1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    286761 (Vcpip1)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     286761 (Vcpip1)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C64
   286761 (Vcpip1)
Ubiquitin system [BR:rno04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   OTU
    286761 (Vcpip1)

SSDB Motif

Pfam:  VCIP135_N OTU ubiquitin

Other DBs

NCBI-GeneID:  286761
NCBI-ProteinID:  NP_789827
RGD:  708520
Ensembl:  ENSRNOG00000006980
UniProt:  Q8CF97
Structure Position

5:9534247..9560889

AA seq 1221 aa
MSQPPPPPPLPPPPPPPEAPQTSSSLAAAATPGGLSKRRDRRILSGSCPDPKCQARLFFP
ASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVMG
LSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVGYG
KDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALREN
LKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLHR
PIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGRDGHLNKPICIAWSSSGRNHYIPLVGI
KGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEVF
MDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELHVP
PEWLAPGGKLYNLAKSTHGQLRPDKNYSFPLNNLVCSYDPVKDVLLPDYGLSNLTACNWC
HGTSVRRVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWEGKEYDNLPEAFPITLEWGGR
VVRETVYWFQYESDPSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKNPD
DYTPVNIDGAHAQRIGDVQGQELESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNIT
EQASVMQKRKTEKLKQEQKGQPRTVSPSTIRDGPSSAPATPTKAPYSPTTSKEKKIRITT
NDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPLQ
HGDRITIEILKGKAEGGPSTAAHSAHTVRQEEIAVTGKLSSKELQEQADKEMYSLCLLAT
LMGEDVWSYAKGLPHMFQQGGVFYNIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRLEL
CVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQLHN
VTAFQGKGHSLGTASSNPHMDPRARETLAVRKHNTGTDFSNSSIKTEPPVFTAASSNSEL
IRIAPGVVTMRDGRQIDPDVVEAQRKKLQEMVSSIQASMDKHLRDQSTEQTPSDLSQRKV
EAVSSSVRPGNLQTGLPESFSLTGGTENLNTETTDSRVADVLGAAFATRSKAQKENSMEE
PEEMDSQDAETTNTTEPMDHS NT seq 3666 nt   +upstreamnt  +downstreamnt
atgtctcagccgccgccgcctcctccgctgccgccgccgccgcctccccccgaggctccg
cagacttcgtcgtccctggcggcggcggctactccggggggcctttcgaaacgaagggac
cggagaatcctttccgggagctgcccggatcccaagtgccaggcgcggctcttcttcccg
gcctcaggttctgtcagcatcgagtgtaccgagtgcggacagcggcacgagcagcaacag
ctgctgggagtggaggaggtgaccgacccggacgtagtgctgcacaatctgctgcggaac
gcgctactcggggtgacgggggctcccaagaagaacacggaactggtaaaggtgatgggc
ctctccaactaccactgcaaattattgtcgcccatattggcacgctatggaatggacaaa
caaacgggccgcgccaagcttctccgggacatgaaccaaggcgaactgttcgattgcgcg
ttactcggtgaccgggccttcctcatcgaaccagagcacgtcaacacagtgggctatggc
aaggaccgatctggaagcctcctatatttgcatgacactctcgaggatatcaaacgggcc
aataaaagtcaagaatgccttattccagtgcatgtggatggggatggacactgcctagtg
catgctgtgtctagggctctagtaggccgagagctcttctggcatgccctgagggagaat
ctgaagcagcactttcagcagcacctagcccgatatcaagccctgtttcatgactttatt
gatgctgcagagtgggaggacattatcaatgaatgtgaccctctgtttgtgccacctgaa
ggtgtccccttaggcctgaggaatatccacatatttggccttgccaatgtgttacatcgt
cccataattctcttagattccctcagtggcatgagaagctctggtgattattcagccacc
tttctacctgggctcatacctgcagagaagtgcactgggagagatggtcatttgaacaag
ccaatctgtattgcgtggagtagctctggtagaaaccattatattcccttggtaggcata
aagggggctgccttgcccaaactacccatgaatttgctacctaaagcatggggtgtgcct
caggaccttattaaaaagtacatcaagcttgaggaggatggtggttgtgttattggagga
gacagaagtttgcaggataagtacttacttaggttggttgctgctatggaggaagtcttt
atggacaaacatggtatccatcctagtttggttgctgatgtacatcagtatttctacaga
aggactggggtgataggagttcagcctgaggaagttacagcagctgctaaaaaagcagta
atggataatcgccttcacaagtgtttgctttgtggtgccctttctgaacttcatgtccct
cctgagtggttggctccaggaggaaaactgtataacctggcaaaaagtactcatggacag
ctgaggcctgacaaaaattacagctttcctttaaacaatttggtttgttcatatgatcca
gtgaaagatgttctgttaccagactatggattgagtaatctaacagcttgtaattggtgc
catggcacatctgtgcgaagagtcagaggcgatggctctattgtatatttggatggagac
agaactaattctaggtctactggtggcaaatgtggttgtggattcaaacacttttgggaa
ggtaaagaatatgacaaccttccagaagcttttcctatcactttggagtggggaggaaga
gtagtcagagaaacagtatattggttccagtatgaaagtgatccatctttgaatagtaat
gtttatgatgttgcaatgaaacttgttaccaagcactttccaggtgaatttgggagtgag
atcctagttcagaaagttgtccacactatattgcatcagactgcaaaaaaaaatcctgac
gattacactcctgtaaatatagatggtgctcatgctcagagaattggagatgtgcaagga
caagaattggagtctcagctaccaactaaaattattcttactggacagaaaacaaaaact
ttgcacaaggaagaattaaacatgagtaaaactgaaagaactattcaacagaacatcaca
gaacaagcttctgtgatgcagaaacggaaaacagagaaattaaaacaagagcaaaagggg
caacccagaactgtttctccaagtactattcgtgatgggccttcatctgcacctgccacc
cccacgaaggctccctactcacctaccacttctaaggagaagaagattcgcataacaact
aatgatggacggcagtccatggttacccttaagtcttcaacaaccttttttgaacttcag
gaaagtatagccagagagttcaacattcctccatatttacagtgtattcgatatggtttt
cctcctaaagagttaatgccaccccaagcaggaatggaaaaggagccagttcctttgcag
catggtgacagaattaccatagagatcttaaaaggcaaagcagaaggtggtccatccact
gctgcacactcagcccacactgtgagacaagaagagattgctgttactggcaagctgtcc
tccaaggaacttcaggagcaagctgacaaagaaatgtattccttgtgtcttttagcaaca
ttaatgggagaagacgtgtggtcttatgcaaagggacttcctcacatgttccagcagggt
ggtgtattctacaatattatgaagaaaactatgggcatggctgatggcaaacattgtact
tttccacatctacctggcaaaacctttgtttataatgcttctgaagacagactggagttg
tgtgtcgatgccgcaggacatttccccattggtcctgatgttgaagatttagttaaagag
gctgtaagtcaggttcgagcagaggctactacaagaagtagggaatcaagcccttcacat
gggttattaaaactaggtagtggtggagtagtgaaaaagaagtctgagcaacttcacaat
gtaactgcctttcaggggaagggccattctctaggaactgcatccagtaacccgcacatg
gatcccagagctagggaaactctggctgtaagaaagcataatacagggacagattttagt
aatagttccattaaaacagagcctcctgtgttcacagctgcttctagtaatagtgagctt
attcgaatagctcctggagtggtaacaatgagagatggtaggcagattgatcccgatgtg
gttgaggcccagcgaaaaaaattgcaggaaatggtttcttctattcaggcatcaatggac
aagcacttgcgggatcaaagtacagagcaaacaccatctgatctttctcaaagaaaagta
gaagctgtgagttcttctgtgaggcctgggaatcttcagactggcttgcctgaatctttt
tctttaactggtggcactgagaatttgaatactgaaacaactgatagtcgtgtagcagat
gtactgggagcagcatttgccacaaggtcaaaagcacaaaaagaaaattccatggaggaa
cctgaagagatggatagtcaagatgctgagacaactaacacaactgagccgatggatcac
tcttga

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