Extract R1 and R2 from sam file generated by bowtie2

Extract R1 and R2 from sam file generated by bowtie2

1

Hi every one

How to extract R1 and R2 from sam file generated by bowtie2 ?


sam


bowtie2


samtools


bam

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updated 14 hours ago by

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4.4k

written 15 hours ago by

0

A combination of two tools can be used to achieve this: gatk PrintReads and picard RevertSam.


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