encode gt of hg38 to machine learning

encode gt of hg38 to machine learning

0

Hi

I’m new in the field ,
I have a large vcf file that have many variants with many sample
I extract gt for each sample / variants to get a matrix to do a machine learning algorithem

now, I need to encode this gt to do a machine learning
I see a stranger numbers in gt like [-1 -1] , [1 5] , [ 1 6 ] , [ 0 -1] ,[ 1 -1],[ 2 -1]
So , what is mean for hg38 ? and How can I encode to use a machine learning ?


machine_learning


gt

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