How to make a UMAP for single cell data and color cells by average expression of a list of cells in scanpy?

How to make a UMAP for single cell data and color cells by average expression of a list of cells in scanpy?

0

Hello,

I have single cell and bulk RNA seq data for both of which I have performed some basic analysis.
For the bulk RNA seq data I have performed DESe2 and I have gotten a list of DE genes. I was wondering if it is possible to project that list of genes to the single cell data.
I would like to make a UMAP where the cells are colored by the average expression of the bulk signature genes. Is that possible and if yes how could I do it?

Thank you


single


scanoy


RNA


cell


seq


UMAP

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