biomaRt crashes R studio
Hey everyone,
I just wanted to execute a script that worked before. However, everytime I try to run it now RStudio gets unresponsive. I didn’t change anything. Does anyone else experience this?
This is an extract from my script:
library(biomaRt)
...
mart <- useMart("ENSEMBL_MART_ENSEMBL")
mart <- useDataset("hsapiens_gene_ensembl", mart)
data_table[, symbol := getBM(mart = mart,
attributes = "hgnc_symbol",
filters = "ensembl_gene_id",
values = `Ensembl Gene ID`)]
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