mapping GO terms to classifications one rank down from the top- level GO categories

mapping GO terms to classifications one rank down from the top- level GO categories

1

Hi all!

I would like to map a list of GO terms (>1000, won’t be able to do it manually) from different GO ranks to one classifications one rank down from the top- level GO categories, i.e. direct children categories of Biological Process, Cellular Component, and Molecular Function. Here is an example from this paper . Then I would like to do a bar graph like this. Which software/package should I use?

Thanks a lot!

My GO list looks like this: [one GO term per line]

GO:0001505
GO:0006259
GO:0006403
...

enter image description here


GO


Gene


Ontology


TopGO


Transcriptomics

• 72 views

Read more here: Source link