No BSgenome for Human HG19 or HG38 with R version 4.2.2 and Bioconductor 3.16

No BSgenome for Human HG19 or HG38 with R version 4.2.2 and Bioconductor 3.16

1

@aac4f0b4

Last seen 17 hours ago

France

Hello,

I’m currently trying to install BSgenome.Hsapiens.UCSC.hg19 and BSgenome.Hsapiens.UCSC.hg38 through bioconductor on my desktop (Windows)
My current R version is 4.2.2.and bioconductor is 3.16

My command is this one:

“`r

if (!require(“BiocManager”, quietly = TRUE))
install.packages(“BiocManager”)

BiocManager::install(“BSgenome.Hsapiens.UCSC.hg19”)
“`r

and as answer I have :

Warning message: package ‘BSgenome.Hsapiens.USCS.hg19’ is not
available for Bioconductor version ‘3.16’

A version of this package for your version of R might be available
elsewhere, see the ideas at
cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages

Would you have any advice to be able to install these packages?
Thanks in advance


BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major

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