syntax errors when running part3 all-against-all

Hello,

I downloaded a set of precomputed 50 genomes. I successfully completed the oma run and have results. I then added in a new genome and reran. The blasts seem to have run fine. Now when oma is reading the all against all files I am getting syntax errors. Because I successfully ran oma without my genome I am pretty sure something is wrong with my inputed DB or the blasts with my genome. Any idea what is going on. CCALY is my genome, you can see that after the syntax errors the output says : # AMPQE vs CCALY done, (109682/109682)

Reading the all-against-all files...

# AMPQE vs AMPQE done, (142372/142372)
# ANOCA vs AMPQE done, (33668/33668)
# ASTMX vs AMPQE done, (42645/42645)
# CAEEL vs AMPQE done, (19978/19978)
# AMPQE vs CAPTE done, (49061/49061)
syntax error:
AssertDatabaseVersionsInSync('11e53381d6de1843','a0bfa85cb9acfa87'):
                                                                   ^
syntax error:
[2338, 33221, 200[[2336, 2485, 185.7128743, 113, 1..62, 802..861, 441.6319949],
                 ^
syntax error:
[2340, 9235, 188.5228724, 94, 2..102, 3..104, 202.6980833] ]):
                                                           ^
syntax error:
6503014, 140, 53..154, 154..255, 398.5450231],
                                            ^
syntax error:
[2340, 9235, 188.5228724, 94, 2..102, 3..104, 202.6980833] ]):
                                                           ^
syntax error:
963, 72766, 191.8781501, 151, 30..165, 321..444, 394.8502758],
  ^
syntax error:
[10966, 39321, 380.7883157, 150, 5..274, 150..412, 174.6143452] ]):
                                                                ^
# AMPQE vs CCALY done, (109682/109682)

Thank you,
Sofia

Read more here: Source link