DOI: 10.18129/B9.bioc.MsDataHub
This is the development version of MsDataHub; for the stable release version, see
MsDataHub.
Mass Spectrometry Data on ExperimentHub
Bioconductor version: Development (3.18)
The MsDataHub package uses the ExperimentHub infrastructure to distribute raw mass spectrometry data files, peptide spectrum matches or quantitative data from proteomics and metabolomics experiments.
Author: Laurent Gatto [aut, cre] 
, Johannes Rainer [aut]
Maintainer: Laurent Gatto <laurent.gatto at uclouvain.be>
Citation (from within R,
enter citation("MsDataHub")):
Installation
To install this package, start R (version
“4.3”) and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("MsDataHub")
For older versions of R, please refer to the appropriate
Bioconductor release.
Documentation
To view documentation for the version of this package installed
in your system, start R and enter:
browseVignettes("MsDataHub")
Details
| biocViews | ExperimentHubSoftware, MassSpectrometry, Metabolomics, Proteomics, Software |
| Version | 1.1.0 |
| In Bioconductor since | BioC 3.17 (R-4.3) (< 6 months) |
| License | Artistic-2.0 |
| Depends | |
| Imports | ExperimentHub, utils |
| LinkingTo | |
| Suggests | ExperimentHubData, DT, BiocStyle, knitr, rmarkdown, testthat (>= 3.0.0), Spectra, mzR, PSMatch, QFeatures |
| SystemRequirements | |
| Enhances | |
| URL | rformassspectrometry.github.io/MsDataHub |
| BugReports | github.com/RforMassSpectrometry/MsDataHub/issues |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report |
Package Archives
Follow
Installation instructions to use this
package in your R session.
Read more here: Source link
